As these are not interconnected at all(in 99.999% of cases) I would suggest the following, and a strong suggestion would be to install it from the ports:
Mysql:
If you use ports to install, you can skip ahead to securing/configuring your installation. The Mysql reference manual has tonnes of information on every part of this
http://dev.mysql.com/doc/refman/5.0/en/index.html
Apache:
Again build from ports, all you need to do is the configuration and that's again covered very well with the online apache documentation with several user cases(the middle column)
http://httpd.apache.org/docs/2.2/
Mail:
if you are new to running an email server I would suggest postfix and it's documentation here
http://www.postfix.org/documentation.html and as a mail client for pop3/imap dovecot and it's well documented wiki
http://wiki.dovecot.org/
The big benefit from using ports is that experienced people have already done the hard part in patching and initial configuration, all you have to do is to tweak it to work how you want it.
A "good" complete free turorial that you are asking for does not exist. It's like going to you car dealer and asking for information which is the best car, best airplane and how to cook your sunday brunch. The non-free tutorial is called paid-support from a company
. However with this forum and many more you can ask questions when you do get into trouble.
